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yibN putative sulfurtransferase YibN [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948131, updated on 3-Dec-2024

Summary

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Official Symbol
yibN
Official Full Name
putative sulfurtransferase YibN
Primary source
ECOCYC:EG12295
Locus tag
b3611
See related
ASAP:ABE-0011805
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3601
Summary
glpE, yceA and yibN are paralogs. [More information is available at EcoGene: EG12295].
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Genomic context

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Sequence:
NC_000913.3 (3784584..3785015, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene glycerol-3-phosphate dehydrogenase Neighboring gene protein export chaperone SecB Neighboring gene reduced glutaredoxin 3 Neighboring gene 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Neighboring gene murein hydrolase activator EnvC

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
  2. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
  3. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
  4. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
  5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
putative sulfurtransferase YibN

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3784584..3785015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418068.1 putative sulfurtransferase YibN [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418068.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A377DBC0, A0A8S0FF87
    Conserved Domains (1) summary
    cd00158
    Location:44 → 133
    RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...
Nucleotide Protein
Heading Accession and Version

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