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yidP putative DNA-binding transcriptional regulator YidP [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948194, updated on 3-Dec-2024

Summary

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Official Symbol
yidP
Official Full Name
putative DNA-binding transcriptional regulator YidP
Primary source
ECOCYC:EG11711
Locus tag
b3684
See related
ASAP:ABE-0012049
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3676
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Genomic context

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Sequence:
NC_000913.3 (3863899..3864615)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene putative PTS enzyme II component GlvB Neighboring gene putative PTS enzyme II component GlvC Neighboring gene putative transport protein YidE Neighboring gene small heat shock protein IbpB Neighboring gene small heat shock protein IbpA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Pérez-Rueda E, et al. Nucleic Acids Res, 2000 Apr 15. PMID 10734204, Free PMC Article
  2. DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication. Burland V, et al. Genomics, 1993 Jun. PMID 7686882
  3. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475
  4. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative DNA-binding transcriptional regulator YidP

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3863899..3864615
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418139.1 putative DNA-binding transcriptional regulator YidP [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418139.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T6QIF3
    Conserved Domains (1) summary
    COG2188
    Location:2 → 227
    MngR; DNA-binding transcriptional regulator, GntR family [Transcription]
Nucleotide Protein
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