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yieP DNA-binding transcriptional regulator YieP [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948263, updated on 3-Dec-2024

Summary

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Official Symbol
yieP
Official Full Name
DNA-binding transcriptional regulator YieP
Primary source
ECOCYC:EG11733
Locus tag
b3755
See related
ASAP:ABE-0012275
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3749
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Genomic context

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Sequence:
NC_000913.3 (3940635..3941327, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ribokinase Neighboring gene DNA-binding transcriptional dual regulator RbsR Neighboring gene putative transporter HsrA Neighboring gene 16S ribosomal RNA Neighboring gene tRNA-Glu

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication. Burland V, et al. Genomics, 1993 Jun. PMID 7686882
  2. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475
  3. Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites. Qin ZS, et al. Nat Biotechnol, 2003 Apr. PMID 12627170
  4. Factors influencing the identification of transcription factor binding sites by cross-species comparison. McCue LA, et al. Genome Res, 2002 Oct. PMID 12368244, Free PMC Article
  5. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding transcriptional regulator YieP

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3940635..3941327 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_026245.1 DNA-binding transcriptional regulator YieP [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for YP_026245.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAJ3TYH8
    Conserved Domains (1) summary
    COG2186
    Location:5 → 227
    FadR; DNA-binding transcriptional regulator, FadR family [Transcription]
Nucleotide Protein
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