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bioP biotin transporter [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948309, updated on 3-Dec-2024

Summary

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Official Symbol
bioP
Official Full Name
biotin transporter
Primary source
ECOCYC:EG11471
Locus tag
b3827
See related
ASAP:ABE-0012504
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3821; yigM
Summary
YigM belongs to the EamA/RhaT transporter family, DMT superfamily. [More information is available at EcoGene: EG11471]. yigM has been identified through bioinformatic analysis as having a possible 54-dependent promoter . [More information is available at EcoCyc: EG11471].
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Genomic context

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Sequence:
NC_000913.3 (4011076..4011975)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene lysophospholipase L2 Neighboring gene phosphosugar phosphatase YigL Neighboring gene DNA-binding transcriptional dual regulator MetR Neighboring gene cobalamin-independent homocysteine transmethylase Neighboring gene putative dienelactone hydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global transcriptional response of Escherichia coli O157:H7 to growth transitions in glucose minimal medium. Bergholz TM, et al. BMC Microbiol, 2007 Oct 29. PMID 17967175, Free PMC Article
  2. Metabolic context and possible physiological themes of sigma(54)-dependent genes in Escherichia coli. Reitzer L, et al. Microbiol Mol Biol Rev, 2001 Sep. PMID 11528004, Free PMC Article
  3. Combined, functional genomic-biochemical approach to intermediary metabolism: interaction of acivicin, a glutamine amidotransferase inhibitor, with Escherichia coli K-12. Smulski DR, et al. J Bacteriol, 2001 Jun. PMID 11344143, Free PMC Article
  4. Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes. Daniels DL, et al. Science, 1992 Aug 7. PMID 1379743
  5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
biotin transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4011076..4011975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418271.1 biotin transporter [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418271.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9ACX5
    Conserved Domains (1) summary
    TIGR00950
    Location:11 → 273
    2A78; Carboxylate/Amino Acid/Amine Transporter
Nucleotide Protein
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