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yigZ IMPACT family member YigZ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948334, updated on 3-Dec-2024

Summary

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Official Symbol
yigZ
Official Full Name
IMPACT family member YigZ
Primary source
ECOCYC:EG11484
Locus tag
b3848
See related
ASAP:ABE-0012571
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3840
Summary
yigZ is a widely conserved gene; its mammalian homolog is the imprinted (paternally expressed) mouse gene impact . [More information is available at EcoCyc: EG11484].
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Genomic context

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Sequence:
NC_000913.3 (4032492..4033106)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA thiolase Neighboring gene multifunctional enoyl-CoA hydratase, 3-hydroxyacyl-CoA epimerase, Delta(3)-cis- Delta(2)-trans-enoyl-CoA isomerase, L-3-hydroxyacyl-CoA dehydrogenase Neighboring gene Xaa-Pro dipeptidase Neighboring gene K(+) transporter TrkH Neighboring gene protoporphyrinogen oxidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Yeast chromosome III: new gene functions. Koonin EV, et al. EMBO J, 1994 Feb 1. PMID 8313894, Free PMC Article
  2. Screening for imprinted genes by allelic message display: identification of a paternally expressed gene impact on mouse chromosome 18. Hagiwara Y, et al. Proc Natl Acad Sci U S A, 1997 Aug 19. PMID 9256468, Free PMC Article
  3. Nucleotide sequence between the fadB gene and the rrnA operon from Escherichia coli. Nakahigashi K, et al. Nucleic Acids Res, 1990 Nov 11. PMID 2243799, Free PMC Article
  4. Structural analysis of a set of proteins resulting from a bacterial genomics project. Badger J, et al. Proteins, 2005 Sep 1. PMID 16021622
  5. Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes. Daniels DL, et al. Science, 1992 Aug 7. PMID 1379743

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables anion binding IEA
Inferred from Electronic Annotation
more info
  
enables guanyl ribonucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables ribonucleoside triphosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of translational initiation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
IMPACT family member YigZ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4032492..4033106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418290.4 IMPACT family member YigZ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418290.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1X3JA74
    Conserved Domains (1) summary
    PRK11568
    Location:1 → 204
    PRK11568; IMPACT family protein
Nucleotide Protein
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