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ytfB cell division protein YtfB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948727, updated on 3-Dec-2024

Summary

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Official Symbol
ytfB
Official Full Name
cell division protein YtfB
Primary source
ECOCYC:G7864
Locus tag
b4206
See related
ASAP:ABE-0013756
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4202
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Genomic context

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Sequence:
NC_000913.3 (4428079..4428717, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 50S ribosomal subunit protein L9 Neighboring gene DUF2686 domain-containing protein YjfZ Neighboring gene pseudo Neighboring gene peptidyl-prolyl cis-trans isomerase FklB Neighboring gene D-serine/alanine/glycine/:H(+)symporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The novel E. coli cell division protein, YtfB, plays a role in eukaryotic cell adhesion. Bottomley AL, et al. Sci Rep, 2020 Apr 21. PMID 32317661, Free PMC Article
  2. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
  3. YtfB, an OapA Domain-Containing Protein, Is a New Cell Division Protein in Escherichia coli. Jorgenson MA, et al. J Bacteriol, 2018 Jul 1. PMID 29686141, Free PMC Article
  4. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
  5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The novel E. coli cell division protein, YtfB, plays a role in eukaryotic cell adhesion.
    Title: The novel E. coli cell division protein, YtfB, plays a role in eukaryotic cell adhesion.
  2. YtfB directly affects cell division, most likely through its OapA domain.
    Title: YtfB, an OapA Domain-Containing Protein, Is a New Cell Division Protein in Escherichia coli.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables metalloendopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables peptidoglycan binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within FtsZ-dependent cytokinesis IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in cell division IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
cell division protein YtfB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4428079..4428717 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418627.4 cell division protein YtfB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418627.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9AMN1, A0A8S7CN62
    Conserved Domains (1) summary
    COG3061
    Location:1 → 212
    OapA; Cell envelope opacity-associated protein A (function unknown) [Function unknown]
Nucleotide Protein
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Gene LinkOut

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