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ytfF inner membrane protein YtfF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948732, updated on 17-Dec-2024

Summary

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Official Symbol
ytfF
Official Full Name
inner membrane protein YtfF
Primary source
ECOCYC:G7867
Locus tag
b4210
See related
ASAP:ABE-0013769
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4206
Summary
YtfF belongs to the EamA/RhaT transporter family, DMT superfamily. [More information is available at EcoGene: EG12506]. YtfF is an inner membrane protein with 10 predicted transmembrane helices. [More information is available at EcoCyc: G7867].
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Genomic context

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Sequence:
NC_000913.3 (4432091..4433056, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene D-serine/alanine/glycine/:H(+)symporter Neighboring gene iron-sulfur cluster repair protein YtfE Neighboring gene NAD(P)H:quinone oxidoreductase Neighboring gene putative transcriptional regulator YtfH

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
  2. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
  3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
inner membrane protein YtfF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4432091..4433056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418631.2 inner membrane protein YtfF [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418631.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7EBI7
    Conserved Domains (1) summary
    COG0697
    Location:1 → 309
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

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