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yjiS DUF1127 domain-containing protein YjiS [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948903, updated on 3-Dec-2024

Summary

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Official Symbol
yjiS
Official Full Name
DUF1127 domain-containing protein YjiS
Primary source
ECOCYC:G7937
Locus tag
b4341
See related
ASAP:ABE-0014236
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4332
Summary
yjiA and yjiS are widely shared genes flanking the variable Immigration Control Region (ICR) restriction-modification cassettes of enterobacterial genomes. [More information is available at EcoGene: EG12580]. The yjiS gene defines the left border of the Immigration Control Region (ICR), and yjiA defines the right border . [More information is available at EcoCyc: G7937].
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Genomic context

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Sequence:
NC_000913.3 (4571751..4571915)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene fused putative DNA-binding transcriptional regulator/putative aminotransferase YjiR Neighboring gene putative uncharacterized protein YjiT Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cassette-like variation of restriction enzyme genes in Escherichia coli C and relatives. Sibley MH, et al. Nucleic Acids Res, 2004. PMID 14744977, Free PMC Article
  2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
DUF1127 domain-containing protein YjiS

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4571751..4571915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418761.1 DUF1127 domain-containing protein YjiS [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418761.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5N8H677
    Conserved Domains (1) summary
    COG5457
    Location:1 → 54
    YjiS; Uncharacterized conserved protein YjiS, DUF1127 family [Function unknown]
Nucleotide Protein
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