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fixC putative oxidoreductase FixC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948958, updated on 17-Dec-2024

Summary

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Official Symbol
fixC
Official Full Name
putative oxidoreductase FixC
Primary source
ECOCYC:EG11564
Locus tag
b0043
See related
ASAP:ABE-0000149
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0044; yaaS
Summary
The fix operon is expressed with the adjacent cai operon, suggesting that the fix operon may also be involved in anaerobic metabolism of carnitine . [More information is available at EcoCyc: EG11564].
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Genomic context

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Sequence:
NC_000913.3 (44180..45466)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative electron transfer flavoprotein FixA Neighboring gene putative electron transfer flavoprotein FixB Neighboring gene putative ferredoxin FixX Neighboring gene putative transporter YaaU Neighboring gene regulator of KefC-mediated potassium transport and quinone oxidoreductase Neighboring gene K(+) : H(+) antiporter KefC

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The distance between Escherichia coli genes is related to gene expression levels. Eyre-Walker A. J Bacteriol, 1995 Sep. PMID 7665529, Free PMC Article
  2. Regulation of the carnitine pathway in Escherichia coli: investigation of the cai-fix divergent promoter region. Buchet A, et al. J Bacteriol, 1998 May. PMID 9573142, Free PMC Article
  3. Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region. Yura T, et al. Nucleic Acids Res, 1992 Jul 11. PMID 1630901, Free PMC Article
  4. The fix Escherichia coli region contains four genes related to carnitine metabolism. Eichler K, et al. J Basic Microbiol, 1995. PMID 7473063
  5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within carnitine metabolic process IEP
Inferred from Expression Pattern
more info
 PubMed 

General protein information

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Preferred Names
putative oxidoreductase FixC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    44180..45466
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414585.1 putative oxidoreductase FixC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414585.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7CTE6
    Conserved Domains (1) summary
    PRK10157
    Location:1 → 428
    PRK10157; putative oxidoreductase FixC; Provisional
Nucleotide Protein
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