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yphE putative ABC transporter ATP-binding protein YphE [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948990, updated on 3-Dec-2024

Summary

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Official Symbol
yphE
Official Full Name
putative ABC transporter ATP-binding protein YphE
Primary source
ECOCYC:G7341
Locus tag
b2547
See related
ASAP:ABE-0008376
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2544
Summary
Predicted yphFEDCB operon. [More information is available at EcoGene: EG13466]. YphE is an ATP-binding component of a predicted ATP-dependent sugar transporter. [More information is available at EcoCyc: G7341].
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Genomic context

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Sequence:
NC_000913.3 (2676850..2678361, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative zinc-binding dehydrogenase YphC Neighboring gene putative ABC transporter membrane subunit YphD Neighboring gene putative ABC transporter periplasmic binding protein YphF Neighboring gene DUF5107 domain-containing protein YphG

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ATP-binding cassette transporters in Escherichia coli. Moussatova A, et al. Biochim Biophys Acta, 2008 Sep. PMID 18634750
  2. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
  3. The Escherichia coli ATP-binding cassette (ABC) proteins. Linton KJ, et al. Mol Microbiol, 1998 Apr. PMID 9593292
  4. Getting in or out: early segregation between importers and exporters in the evolution of ATP-binding cassette (ABC) transporters. Saurin W, et al. J Mol Evol, 1999 Jan. PMID 9873074
  5. The Transporter Classification Database (TCDB): recent advances. Saier MH Jr, et al. Nucleic Acids Res, 2016 Jan 4. PMID 26546518, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex IC
Inferred by Curator
more info
 PubMed 
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
putative ABC transporter ATP-binding protein YphE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2676850..2678361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417042.1 putative ABC transporter ATP-binding protein YphE [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417042.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7CL54
    Conserved Domains (1) summary
    COG1129
    Location:3 → 499
    MglA; ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Nucleotide Protein
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