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VOLCADRAFT_93168 uncharacterized protein [ Volvox carteri f. nagariensis ]

Gene ID: 9628743, updated on 10-Jan-2024

Summary

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Gene symbol
VOLCADRAFT_93168
Gene description
uncharacterized protein
Locus tag
VOLCADRAFT_93168
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Volvox carteri f. nagariensis (strain: Eve, forma: nagariensis)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox
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Genomic context

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See VOLCADRAFT_93168 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
51

NW_003307573.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene 26S proteasome regulatory complex

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307573.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Prochnik SE, et al. Science, 2010 Jul 9. PMID 20616280, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_002952492.1
  • appears to contain kinesin motor domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307573.1 Reference assembly

    Range
    270701..311591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002952446.1 → XP_002952492.1  uncharacterized protein VOLCADRAFT_93168 [Volvox carteri f. nagariensis]

    See identical proteins and their annotated locations for XP_002952492.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8U1G9
    Conserved Domains (5) summary
    smart00129
    Location:1328 → 1670
    KISc; Kinesin motor, catalytic domain. ATPase
    sd00006
    Location:812 → 837
    TPR; TPR repeat [structural motif]
    cd00106
    Location:1327 → 1660
    KISc; Kinesin motor domain
    pfam13414
    Location:812 → 874
    TPR_11; TPR repeat
    cl21478
    Location:1696 → 1755
    ATP-synt_B; ATP synthase B/B' CF(0)
Nucleotide Protein
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