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rpn9 26S proteasome regulatory complex [ Volvox carteri f. nagariensis ]

Gene ID: 9628744, updated on 10-Jan-2024

Summary

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Gene symbol
rpn9
Gene description
26S proteasome regulatory complex
Locus tag
VOLCADRAFT_109166
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Volvox carteri f. nagariensis (strain: Eve, forma: nagariensis)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox
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Genomic context

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See rpn9 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_003307573.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307573.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Prochnik SE, et al. Science, 2010 Jul 9. PMID 20616280, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle, lid subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome regulatory complex
XP_002952493.1
  • lid subcomplex, non-ATPase subunit Rpn9 (subunit 13; Psd13; PSMD13)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307573.1 Reference assembly

    Range
    314475..318594
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002952447.1 → XP_002952493.1  26S proteasome regulatory complex [Volvox carteri f. nagariensis]

    See identical proteins and their annotated locations for XP_002952493.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8U1H0
    Conserved Domains (1) summary
    pfam01399
    Location:238 → 346
    PCI; PCI domain
Nucleotide Protein
Heading Accession and Version

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