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VOLCADRAFT_105555 uncharacterized protein [ Volvox carteri f. nagariensis ]

Gene ID: 9628753, updated on 10-Jan-2024

Summary

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Gene symbol
VOLCADRAFT_105555
Gene description
uncharacterized protein
Locus tag
VOLCADRAFT_105555
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Volvox carteri f. nagariensis (strain: Eve, forma: nagariensis)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox
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Genomic context

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See VOLCADRAFT_105555 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
14

NW_003307573.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene chloroplast precursor Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307573.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Prochnik SE, et al. Science, 2010 Jul 9. PMID 20616280, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of beta-galactosidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_002952502.1
  • predicted protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307573.1 Reference assembly

    Range
    425506..433613
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002952456.1 → XP_002952502.1  uncharacterized protein VOLCADRAFT_105555 [Volvox carteri f. nagariensis]

    See identical proteins and their annotated locations for XP_002952502.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8U1I9
    Conserved Domains (1) summary
    cl07893
    Location:406 → 460
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
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