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LOC9642916 helicase-like transcription factor [ Selaginella moellendorffii ]

Gene ID: 9642916, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9642916
Gene description
helicase-like transcription factor
Locus tag
SELMODRAFT_40849
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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Genomic context

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See LOC9642916 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314338.1 (708177..711110, complement)

NW_003314338.1Genomic Context describing neighboring genes Neighboring gene formin-like protein 20 Neighboring gene GDSL esterase/lipase At4g01130 Neighboring gene canalicular multispecific organic anion transporter 2-like Neighboring gene uncharacterized LOC112341153

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314338 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helicase-like transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314338.1 Reference v1.0

    Range
    708177..711110 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024660814.1 → XP_024516582.1  helicase-like transcription factor

    UniProtKB/TrEMBL
    D8SUD1
    Conserved Domains (2) summary
    COG0553
    Location:173 → 872
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    pfam08797
    Location:26 → 119
    HIRAN; HIRAN domain
Nucleotide Protein
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