U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC9642920 flagellar WD repeat-containing protein Pf20 [ Selaginella moellendorffii ]

Gene ID: 9642920, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC9642920
Gene description
flagellar WD repeat-containing protein Pf20
Locus tag
SELMODRAFT_125093
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC9642920 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314338.1 (758725..762157)

NW_003314338.1Genomic Context describing neighboring genes Neighboring gene vacuolar iron transporter 1.2 Neighboring gene kinesin-like protein KIN-14L Neighboring gene probable prefoldin subunit 2 Neighboring gene uncharacterized LOC112341154 Neighboring gene uncharacterized protein At2g33490

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003314338 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
flagellar WD repeat-containing protein Pf20

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314338.1 Reference v1.0

    Range
    758725..762157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024660798.1 → XP_024516566.1  flagellar WD repeat-containing protein Pf20 isoform X1

    UniProtKB/TrEMBL
    D8SUE2
    Conserved Domains (2) summary
    cd00200
    Location:293 → 579
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:302 → 339
    7WD40; WD40 repeat [structural motif]

  2. XM_024660802.1 → XP_024516570.1  flagellar WD repeat-containing protein Pf20 isoform X2

    Conserved Domains (2) summary
    cd00200
    Location:293 → 480
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:302 → 339
    7WD40; WD40 repeat [structural motif]

  3. XM_024660801.1 → XP_024516569.1  flagellar WD repeat-containing protein Pf20 isoform X1

    UniProtKB/TrEMBL
    D8SUE2
    Conserved Domains (2) summary
    cd00200
    Location:293 → 579
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:302 → 339
    7WD40; WD40 repeat [structural motif]

  4. XM_024660800.1 → XP_024516568.1  flagellar WD repeat-containing protein Pf20 isoform X1

    UniProtKB/TrEMBL
    D8SUE2
    Conserved Domains (2) summary
    cd00200
    Location:293 → 579
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:302 → 339
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials