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LOC9643163 indole-3-acetic acid-amido synthetase GH3.10 [ Selaginella moellendorffii ]

Gene ID: 9643163, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9643163
Gene description
indole-3-acetic acid-amido synthetase GH3.10
Locus tag
SELMODRAFT_125145
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
Also known as
JAR1L7-1
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Genomic context

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See LOC9643163 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314338.1 (894852..896539, complement)

NW_003314338.1Genomic Context describing neighboring genes Neighboring gene F-box/LRR-repeat protein 4 Neighboring gene indole-3-acetic acid-amido synthetase GH3.10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314338 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acid-amino acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
indole-3-acetic acid-amido synthetase GH3.10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314338.1 Reference v1.0

    Range
    894852..896539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024660765.1 → XP_024516533.1  indole-3-acetic acid-amido synthetase GH3.10

    UniProtKB/TrEMBL
    D8SUH4
    Conserved Domains (1) summary
    pfam03321
    Location:4 → 465
    GH3; GH3 auxin-responsive promoter
Nucleotide Protein
Heading Accession and Version

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