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dapE succinyl-diaminopimelate desuccinylase [ Vreelandella aquamarina ]

Gene ID: 97277211, updated on 24-Dec-2024

Summary

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Gene symbol
dapE
Gene description
succinyl-diaminopimelate desuccinylase
Locus tag
HME01_RS10415
Gene type
protein coding
Organism
Vreelandella aquamarina (strain: NBRC 15608, culture-collection: NBRC:15608, type-material: type strain of Halomonas meridiana)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Vreelandella
Old locus tag
HME01_20300
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Genomic context

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NZ_BJOI01000032.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Neighboring gene Spx/MgsR family RNA polymerase-binding regulatory protein Neighboring gene succinyldiaminopimelate transaminase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_BJOI01000032.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Kinetic and spectroscopic characterization of the E134A- and E134D-altered dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase from Haemophilus influenzae. Davis R, et al. J Biol Inorg Chem, 2006 Mar. PMID 16421726
  2. Substrate specificity, metal binding properties, and spectroscopic characterization of the DapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase from Haemophilus influenzae. Bienvenue DL, et al. Biochemistry, 2003 Sep 16. PMID 12962500
  3. DapE can function as an aspartyl peptidase in the presence of Mn2+. Broder DH, et al. J Bacteriol, 2003 Aug. PMID 12896993, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
succinyl-diaminopimelate desuccinylase
WP_062374867.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_BJOI01000032.1 Reference assembly

    Range
    385..1557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_062374867.1 MULTISPECIES: succinyl-diaminopimelate desuccinylase [Halomonadaceae]

    UniProtKB/TrEMBL
    A0A1N6CPF4
Nucleotide Protein
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