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ruvX Holliday junction resolvase RuvX [ Pseudomonas ogarae ]

Gene ID: 98113946, updated on 30-Jan-2025

Summary

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Gene symbol
ruvX
Gene description
Holliday junction resolvase RuvX
Locus tag
HU749_RS28090
Gene type
protein coding
Organism
Pseudomonas ogarae (strain: SWRI108, type-material: type strain of Pseudomonas zarinae)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
HU749_028090
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Genomic context

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NZ_CP077086.1Genomic Context describing neighboring genes Neighboring gene energy transducer TonB Neighboring gene YqgE/AlgH family protein Neighboring gene aspartate carbamoyltransferase catalytic subunit Neighboring gene bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR Neighboring gene dihydroorotase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP077086.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mutations in the essential Escherichia coli gene, yqgF, and their effects on transcription. Iwamoto A, et al. J Mol Microbiol Biotechnol, 2012. PMID 22353788
  2. Solution structure of the hypothetical protein YqgF from Escherichia coli reveals an RNAse H fold. Liu D, et al. J Biomol NMR, 2003 Dec. PMID 14512736
  3. SURVEY AND SUMMARY: holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories. Aravind L, et al. Nucleic Acids Res, 2000 Sep 15. PMID 10982859, Free PMC Article
  4. Reliable Identification of Environmental Pseudomonas Isolates Using the rpoD Gene. Girard L, et al. Microorganisms, 2020 Jul 31. PMID 32752051, Free PMC Article
  5. The Ever-Expanding Pseudomonas Genus: Description of 43 New Species and Partition of the Pseudomonas putida Group. Girard L, et al. Microorganisms, 2021 Aug 18. PMID 34442845, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Holliday junction resolvase RuvX
WP_003177497.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP077086.1 Reference assembly

    Range
    6343032..6343469
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003177497.1 MULTISPECIES: Holliday junction resolvase RuvX [Pseudomonas]

    See identical proteins and their annotated locations for WP_003177497.1

    UniProtKB/Swiss-Prot
    Q9F4I8
    UniProtKB/TrEMBL
    A0A0N9WVL6, A0A0Q7A0V7, A0A176NL20, A0A1G4QSI8, A0A1G5YEZ7, A0A1I5G8G8, A0A1K1S6L7, A0A1V3RUR8, A0A2K4FT08, A0A923FKK5, A0A923FND6, A0AAD1GV55, A0AAJ3FWI1, A0AAJ4NW43, F2K688, J2E7A3
Nucleotide Protein
Heading Accession and Version