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    Atp5mk-ps2 ATP synthase membrane subunit K, pseudogene 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 103693430, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Atp5mk-ps2provided by RGD
    Official Full Name
    ATP synthase membrane subunit K, pseudogene 2provided by RGD
    Primary source
    RGD:9203006
    See related
    AllianceGenome:RGD:9203006
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 6. Orthologous to human ATP5MK (ATP synthase membrane subunit k). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Atp5mk-ps2 in Genome Data Viewer
    Location:
    10q31
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (86708854..86709185, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (86208590..86208921, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (89187162..89187504, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene receptor activity modifying protein 2 Neighboring gene vacuolar protein sorting 25 homolog Neighboring gene WNK lysine deficient protein kinase 4 Neighboring gene cytochrome C oxidase assembly factor 3 Neighboring gene cyclin N-terminal domain containing 1 Neighboring gene beclin 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Association of two proteolipids of unknown function with ATP synthase from bovine heart mitochondria. Chen R, et al. FEBS Lett, 2007 Jul 10. PMID 17570365
    2. Identification of two proteins associated with mammalian ATP synthase. Meyer B, et al. Mol Cell Proteomics, 2007 Oct. PMID 17575325
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Other Names

    • ATP synthase membrane subunit DAPIT, mitochondrial
    • up-regulated during skeletal muscle growth protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_081579.1 

      Range
      101..432
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      86708854..86709185 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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