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    COMMD5P1 COMMD5 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 101928879, updated on 28-Oct-2024

    Summary

    Official Symbol
    COMMD5P1provided by HGNC
    Official Full Name
    COMMD5 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:56190
    See related
    Ensembl:ENSG00000173966 AllianceGenome:HGNC:56190
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See COMMD5P1 in Genome Data Viewer
    Location:
    4q12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (53575714..53576387)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (57063001..57063674)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (54441881..54442554)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377654 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:54243526-54244074 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:54244075-54244623 Neighboring gene factor interacting with PAPOLA and CPSF1 Neighboring gene ligand of numb-protein X 1 Neighboring gene LNX1 antisense RNA 1 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:54458833-54459745 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:54467685-54468184 Neighboring gene LNX1 antisense RNA 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21565 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21566 Neighboring gene uncharacterized LOC100506444 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21567 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21568 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:54584896-54585497

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_073442.1 

      Range
      101..774
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      53575714..53576387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      57063001..57063674
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)