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    ORNANAV1R3042 vomeronasal 1 receptor ornAnaV1R3042 [ Ornithorhynchus anatinus (platypus) ]

    Gene ID: 100080508, updated on 30-Apr-2024

    Summary

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    Gene symbol
    ORNANAV1R3042
    Gene description
    vomeronasal 1 receptor ornAnaV1R3042
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Ornithorhynchus anatinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
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    Genomic context

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    See ORNANAV1R3042 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    105 current mOrnAna1.pri.v4 (GCF_004115215.2) Unplaced Scaffold NW_024396688.1 (32350..33268, complement)

    NW_024396688.1Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor ornAnaV1R-ps3231 pseudogene Neighboring gene small nucleolar RNA SNORA7 Neighboring gene vomeronasal 1 receptor ornAnaV1R-ps3271 pseudogene Neighboring gene vomeronasal 1 receptor ornAnaV1R-ps3472 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024396688 Unplaced Scaffold Reference mOrnAna1.pri.v4 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pheromone receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vomeronasal 1 receptor ornAnaV1R3042

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001253434.1 → NP_001240363.1  vomeronasal 1 receptor ornAnaV1R3042

      Status: INFERRED

      Source sequence(s)
      DS182723
      Conserved Domains (1) summary
      pfam03402
      Location:44 → 299
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mOrnAna1.pri.v4 Primary Assembly

    Genomic

    1. NW_024396688.1 Reference mOrnAna1.pri.v4 Primary Assembly

      Range
      32350..33268 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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