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    LOC105370082 uncharacterized LOC105370082 [ Homo sapiens (human) ]

    Gene ID: 105370082, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105370082
    Gene description
    uncharacterized LOC105370082
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105370082 in Genome Data Viewer
    Location:
    12q24.33
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (131225199..131262761, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (131267322..131302688, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor D1 Neighboring gene uncharacterized LOC107984452 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7355 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7356 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7357 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131616699-131617331 Neighboring gene long intergenic non-protein coding RNA 1257 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131689145-131689646 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7358 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7359 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7360 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:131707318-131707489 Neighboring gene Sharpr-MPRA regulatory region 713 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131719246-131719855 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:131746328-131746828 Neighboring gene uncharacterized LOC107987177 Neighboring gene ribosomal protein S6 pseudogene 20

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      131225199..131262761 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_945559.3 RNA Sequence

    2. XR_945558.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      131267322..131302688 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007083275.1 RNA Sequence

    2. XR_007083274.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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