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    LOC107986131 uncharacterized LOC107986131 [ Homo sapiens (human) ]

    Gene ID: 107986131, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC107986131
    Gene description
    uncharacterized LOC107986131
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC107986131 in Genome Data Viewer
    Location:
    3q22.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (130153174..130155747)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:129818109-129818938 Neighboring gene family with sequence similarity 86, member A pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20520 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20521 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14731 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14732 Neighboring gene uncharacterized LOC124909432 Neighboring gene long intergenic non-protein coding RNA 2021 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:129857063-129857830 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:129871903-129872656 Neighboring gene uncharacterized LOC107986133 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20522 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 3 Neighboring gene uncharacterized LOC124906285 Neighboring gene uncharacterized LOC124906287

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000003.12 Chromosome 3 Reference GRCh38.p14 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      130153174..130155747
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001740905.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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