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    LOC105377422 uncharacterized LOC105377422 [ Homo sapiens (human) ]

    Gene ID: 105377422, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC105377422
    Gene description
    uncharacterized LOC105377422
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC105377422 in Genome Data Viewer
    Location:
    4q28.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (131104704..131136251, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (134408622..134440134, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_74530 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_74536 Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 56 Neighboring gene piggyBac transposable element derived 4 pseudogene 4 Neighboring gene Sharpr-MPRA regulatory region 6093 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:131553588-131554787 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:131567488-131567988 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:131688324-131689108 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:131934342-131934873 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:132130190-132130788 Neighboring gene RNA, U6 small nuclear 224, pseudogene Neighboring gene uncharacterized LOC105377423

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      131104704..131136251 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_939196.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      134408622..134440134 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007074289.1 RNA Sequence