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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001347357.2 → NP_001334286.1 replication factor C subunit 1 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC138654
- Consensus CDS
-
CCDS84885.1
- UniProtKB/Swiss-Prot
-
P35601
- UniProtKB/TrEMBL
- G3UXL4, Q5U4B1
- Related
- ENSMUSP00000144954.2, ENSMUST00000203471.3
-
NM_001347358.2 → NP_001334287.1 replication factor C subunit 1 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses two alternate in-frame splice junctions compared to variant 1. The resulting isoform (3) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AC138654
- Consensus CDS
-
CCDS84884.1
- UniProtKB/Swiss-Prot
-
P35601
- UniProtKB/TrEMBL
-
A0A0N5E9G7
- Related
- ENSMUSP00000134444.5, ENSMUST00000172732.8
-
NM_001421208.1 → NP_001408137.1 replication factor C subunit 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC138654
- UniProtKB/Swiss-Prot
-
P35601
-
NM_001421209.1 → NP_001408138.1 replication factor C subunit 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC138654
- UniProtKB/Swiss-Prot
-
P35601
- UniProtKB/TrEMBL
-
G3UWX1
- Related
- ENSMUSP00000145385.2, ENSMUST00000203581.3
-
NM_011258.3 → NP_035388.2 replication factor C subunit 1 isoform 2
See identical proteins and their annotated locations for NP_035388.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice junction compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is 1 aa shorter compared to isoform 1.
- Source sequence(s)
-
AC138654
- Consensus CDS
-
CCDS39096.1
- UniProtKB/Swiss-Prot
-
P35601
- UniProtKB/TrEMBL
- G3UZD0, G3X8Z6
- Related
- ENSMUSP00000144980.2, ENSMUST00000204965.3
- Conserved Domains (4) summary
-
- smart00382
Location:632 → 762
- AAA; ATPases associated with a variety of cellular activities
- cd00027
Location:406 → 477
- BRCT; Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo ...
- pfam00004
Location:632 → 760
- AAA; ATPase family associated with various cellular activities (AAA)
- pfam08519
Location:899 → 1052
- RFC1; Replication factor RFC1 C terminal domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000071.7 Reference GRCm39 C57BL/6J
- Range
-
65419195..65492988 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)