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    IFT57 Intraflagellar transport 57 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33579, updated on 9-Dec-2024

    Summary

    Official Symbol
    IFT57provided by FlyBase
    Official Full Name
    Intraflagellar transport 57provided by FlyBase
    Primary source
    FLYBASE:FBgn0031550
    Locus tag
    Dmel_CG8853
    See related
    AllianceGenome:FB:FBgn0031550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG8853; che-13; Che-13; CHE-13; Dmel\CG8853; Hippi; IFT55
    Summary
    Predicted to be involved in several processes, including activation of cysteine-type endopeptidase activity involved in apoptotic process; apoptotic process; and cilium organization. Predicted to be located in ciliary basal body. Predicted to be part of intraciliary transport particle B. Predicted to be active in Golgi apparatus; cilium; and microtubule organizing center. Is expressed in spermatozoon. Human ortholog(s) of this gene implicated in orofaciodigital syndrome XVIII. Orthologous to human IFT57 (intraflagellar transport 57). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See IFT57 in Genome Data Viewer
    Location:
    24A1-24A1; 2-10 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (3530789..3532678)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (3530789..3532678)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Scavenger receptor class C, type IV Neighboring gene uncharacterized protein Neighboring gene spindly Neighboring gene long non-coding RNA:CR44308 Neighboring gene drumstick

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in cilium assembly ISM
    Inferred from Sequence Model
    more info
    PubMed 
    involved_in cilium assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in intraciliary transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in non-motile cilium assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of cysteine-type endopeptidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in ciliary basal body ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in cilium IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cilium ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of intraciliary transport particle B IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of intraciliary transport particle B ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in microtubule organizing center IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    intraflagellar transport 57
    Names
    CG8853-PA
    Che-13 ortholog
    IFT57-PA
    hippi

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      3530789..3532678
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134948.2NP_608792.1  intraflagellar transport 57 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608792.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W4R8, Q9VQS5, S5MIX7
      Related
      FBpp0077218
      Conserved Domains (1) summary
      pfam10498
      Location:29384
      IFT57; Intra-flagellar transport protein 57