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    IGKV1OR-3 immunoglobulin kappa variable 1/OR-3 (pseudogene) [ Homo sapiens (human) ]

    Gene ID: 644731, updated on 10-Dec-2024

    Summary

    Official Symbol
    IGKV1OR-3provided by HGNC
    Official Full Name
    immunoglobulin kappa variable 1/OR-3 (pseudogene)provided by HGNC
    Primary source
    HGNC:HGNC:5762
    See related
    IMGT/GENE-DB:IGKV1/OR-3; AllianceGenome:HGNC:5762
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    IGKVPZ3; IGKV1OR3; IGKV1/OR-3
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    Genomic context

    See IGKV1OR-3 in Genome Data Viewer
    Location:
    9q21.11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (65771148..65771469)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (40620757..40621078, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (70394576..70394897, complement)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene Zn regulated GTPase metalloprotein activator 1E Neighboring gene Sharpr-MPRA regulatory region 13873 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:70489243-70489833 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:70450935-70451544 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:70427620-70428156 Neighboring gene forkhead box D4 like 4 Neighboring gene uncharacterized LOC101928381 Neighboring gene formin-2-like

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • immunoglobulin kappa variable 1-5 (IGKV1-5) pseudogene
    • immunoglobulin kappa variable region pseudogene Z3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_065962.1 

      Range
      101..422
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      65771148..65771469
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      40620757..40621078 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)