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    4932414J04Rik RIKEN cDNA 4932414J04 gene [ Mus musculus (house mouse) ]

    Gene ID: 237694, updated on 22-Oct-2024

    Summary

    Official Symbol
    4932414J04Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4932414J04 geneprovided by MGI
    Primary source
    MGI:MGI:3605619
    See related
    Ensembl:ENSMUSG00000078962 AllianceGenome:MGI:3605619
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 1.2) See more
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    Genomic context

    See 4932414J04Rik in Genome Data Viewer
    Location:
    11 A3.1; 11 13.89 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (21444730..21461180, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (21494730..21511180, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene RAB5C, member RAS oncogene family pseudogene Neighboring gene predicted gene 12046 Neighboring gene STARR-positive B cell enhancer ABC_E6958 Neighboring gene STARR-seq mESC enhancer starr_28848 Neighboring gene STARR-seq mESC enhancer starr_28849 Neighboring gene malate dehydrogenase 1, NAD (soluble) Neighboring gene WD repeat containing planar cell polarity effector Neighboring gene phosphoglycerate mutase 1, pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_028259.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK030001, AL772195
      Related
      ENSMUST00000152483.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      21444730..21461180 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_172792.2: Suppressed sequence

      Description
      NM_172792.2: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.