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    LOC100128993 uncharacterized LOC100128993 [ Homo sapiens (human) ]

    Gene ID: 100128993, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC100128993
    Gene description
    uncharacterized LOC100128993
    See related
    Ensembl:ENSG00000253557
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 6.4) See more
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    Genomic context

    See LOC100128993 in Genome Data Viewer
    Location:
    8p22-p21.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (19183674..19245522, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (19448690..19510404, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (19041184..19103032, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene pleckstrin and Sec7 domain containing 3 Neighboring gene uncharacterized LOC124901898 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:18941277-18942070 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:18942071-18942864 Neighboring gene uncharacterized LOC105379301 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:19034764-19035693 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:19051482-19052681 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:19068899-19069055 Neighboring gene uncharacterized LOC105379300 Neighboring gene ATPase plasma membrane Ca2+ transporting 1 pseudogene Neighboring gene uncharacterized LOC105379306

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome wide association and linkage analyses identified three loci-4q25, 17q23.2, and 10q11.21-associated with variation in leukocyte telomere length: the Long Life Family Study.
    EBI GWAS Catalog
    Genome-wide association study of primary dentition pit-and-fissure and smooth surface caries.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038919.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AC100849, AW511194, DA928996, DB022357
      Related
      ENST00000807927.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      19183674..19245522 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      19448690..19510404 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)