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    yjiA P-loop guanosine triphosphatase YjiA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948882, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yjiA
    Official Full Name
    P-loop guanosine triphosphatase YjiA
    Primary source
    ECOCYC:EG10021
    Locus tag
    b4352
    See related
    ASAP:ABE-0014273
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4342
    Summary
    Binds TrxA (Kumar, 2004). [More information is available at EcoGene: EG10021]. The YjiA protein was overexpressed, purified, and the crystal structure was determined at 2.4 resolution . [More information is available at EcoCyc: EG10021].
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    Genomic context

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    Sequence:
    NC_000913.3 (4587909..4588865, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene type I restriction enzyme EcoKI endonuclease subunit Neighboring gene Type IV methyl-directed restriction enzyme EcoKMrr Neighboring gene PF04328 family protein YjiX Neighboring gene pyruvate:H(+) symporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cassette-like variation of restriction enzyme genes in Escherichia coli C and relatives. Sibley MH, et al. Nucleic Acids Res, 2004. PMID 14744977, Free PMC Article
    2. Crystal structure of the Escherichia coli YjiA protein suggests a GTP-dependent regulatory function. Khil PP, et al. Proteins, 2004 Feb 1. PMID 14696199
    3. Proteomic analysis of thioredoxin-targeted proteins in Escherichia coli. Kumar JK, et al. Proc Natl Acad Sci U S A, 2004 Mar 16. PMID 15004283, Free PMC Article
    4. A subset of the diverse COG0523 family of putative metal chaperones is linked to zinc homeostasis in all kingdoms of life. Haas CE, et al. BMC Genomics, 2009 Oct 12. PMID 19822009, Free PMC Article
    5. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables identical protein binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables membrane scission GTPase motor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transition metal ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    P-loop guanosine triphosphatase YjiA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4587909..4588865 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418772.4 P-loop guanosine triphosphatase YjiA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418772.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1KVL5
      Conserved Domains (1) summary
      PRK11537
      Location:1 → 318
      PRK11537; putative GTP-binding protein YjiA; Provisional
    Nucleotide Protein
    Heading Accession and Version

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