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    pepE peptidase E [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948520, updated on 17-Dec-2024

    Summary

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    Official Symbol
    pepE
    Official Full Name
    peptidase E
    Primary source
    ECOCYC:EG11920
    Locus tag
    b4021
    See related
    ASAP:ABE-0013146
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4013
    Summary
    PepE hydrolyzes peptides bond in dipeptides where the first amino acid is aspartate . [More information is available at EcoCyc: EG11920].
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    Genomic context

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    Sequence:
    NC_000913.3 (4229453..4230142, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene cobalamin-dependent methionine synthase Neighboring gene putative inorganic phosphate export protein YjbB Neighboring gene 23S rRNA pseudouridine(2604) and tRNA(Tyr) pseudouridine(35) synthase Neighboring gene DUF3811 domain-containing protein YjbD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Biochemical characterization of alpha-aspartyl dipeptidase. Cloning and expression of its gene. Zhang H, et al. Ann N Y Acad Sci, 1998 Dec 13. PMID 9928148
    2. Cloning and physical map position of an alpha-aspartyl dipeptidase gene, pepE, from Escherichia coli. Conlin CA, et al. J Bacteriol, 1994 Mar. PMID 8113205, Free PMC Article
    3. Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes. Blattner FR, et al. Nucleic Acids Res, 1993 Nov 25. PMID 8265357, Free PMC Article
    4. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
    5. Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. Hu P, et al. PLoS Biol, 2009 Apr 28. PMID 19402753, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables dipeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables peptidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables serine-type peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    peptidase E
    NP_418445.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4229453..4230142 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418445.1 peptidase E [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418445.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T6A0J7
      Conserved Domains (1) summary
      PRK05282
      Location:1 → 229
      PRK05282; dipeptidase PepE
    Nucleotide Protein
    Heading Accession and Version

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