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    yajQ nucleotide binding protein YajQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945063, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yajQ
    Official Full Name
    nucleotide binding protein YajQ
    Primary source
    ECOCYC:G6240
    Locus tag
    b0426
    See related
    ASAP:ABE-0001478
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0420
    Summary
    YajQ is a survival protein required for MazF-mediated survival of a small subpopulation after inhibition of translation (Amitai, 2009). [More information is available at EcoGene: EG13613]. YajQ is a nucleotide binding protein . [More information is available at EcoCyc: G6240].
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    Genomic context

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    Sequence:
    NC_000913.3 (444683..445174)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene tRNA uridine 4-sulfurtransferase Neighboring gene protein/nucleic acid deglycase 3 Neighboring gene 2-dehydropantoate 2-reductase Neighboring gene putative transport protein YajR Neighboring gene heme O synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The role of host protein YajQ in the temporal control of transcription in bacteriophage Phi6. Qiao X, et al. Proc Natl Acad Sci U S A, 2008 Oct 14. PMID 18836083, Free PMC Article
    2. 1H, 13C and 15N resonance assignment of YajQ, a protein of unknown structure and function from Escherichia coli. Miron S, et al. J Biomol NMR, 2001 Jul. PMID 11519751
    3. Phyletic profiling with cliques of orthologs is enhanced by signatures of paralogy relationships. Skunca N, et al. PLoS Comput Biol, 2013. PMID 23308060, Free PMC Article
    4. Genome-Wide Screening of Oxidizing Agent Resistance Genes in Escherichia coli. Chen H, et al. Antioxidants (Basel), 2021 May 27. PMID 34072091, Free PMC Article
    5. Structural and nucleotide-binding properties of YajQ and YnaF, two Escherichia coli proteins of unknown function. Saveanu C, et al. Protein Sci, 2002 Nov. PMID 12381839, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on mature peptide
      Title: Structural and nucleotide-binding properties of YajQ and YnaF, two Escherichia coli proteins of unknown function.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables GTP binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables nucleotide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables tRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to hydrogen peroxide IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nucleotide binding protein YajQ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      444683..445174
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414960.2 nucleotide binding protein YajQ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414960.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9ALJ0
      Conserved Domains (1) summary
      pfam04461
      Location:2 → 162
      DUF520; Protein of unknown function (DUF520)
    Nucleotide Protein
    Heading Accession and Version

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