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    UBE2Q2P2 UBE2Q2 pseudogene 2 [ Homo sapiens (human) ]

    Gene ID: 100134869, updated on 22-Oct-2024

    Summary

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    Official Symbol
    UBE2Q2P2provided by HGNC
    Official Full Name
    UBE2Q2 pseudogene 2provided by HGNC
    Primary source
    HGNC:HGNC:37440
    See related
    Ensembl:ENSG00000290945 AllianceGenome:HGNC:37440
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    UBE2QP2; UBE2Q2P3
    Expression
    Broad expression in stomach (RPKM 2.4), testis (RPKM 2.2) and 24 other tissues See more
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    Genomic context

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    See UBE2Q2P2 in Genome Data Viewer
    Location:
    15q25.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (82355136..82415611)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (80219256..80279739)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (82647354..82707816)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene dynamin 1 pseudogene 43 Neighboring gene golgin A6 family like 10 Neighboring gene NANOG hESC enhancer GRCh37_chr15:82798244-82798745 Neighboring gene ribosomal protein L9 pseudogene 8 Neighboring gene golgin A6 family like 9 Neighboring gene H3K4me1 hESC enhancers GRCh37_chr15:83109001-83109502 and GRCh37_chr15:83006785-83007776 Neighboring gene dynamin 1 pseudogene 36

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074
    2. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. Brandenberger R, et al. Nat Biotechnol, 2004 Jun. PMID 15146197
    3. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. Choudhury NR, et al. BMC Biol, 2017 Nov 8. PMID 29117863, Free PMC Article
    4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article
    5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Other Names

    • ubiquitin conjugating enzyme E2 Q2 pseudogene 2
    • ubiquitin conjugating enzyme E2Q family member 2 pseudogene 2
    • ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 3
    • ubiquitin-conjugating enzyme E2Q family pseudogene 2

    Clone Names

    • MGC87249

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_004847.3 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC243919, BC066934, DA194105
      Related
      ENST00000800991.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      82355136..82415611
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187606.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      144196..204696
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      80219256..80279739
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_016597.1: Suppressed sequence

      Description
      NG_016597.1: This RefSeq was permanently suppressed after re-review of the locus identified that it was transcribed.

    2. NR_024474.1: Suppressed sequence

      Description
      NR_024474.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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