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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_050748.2 RefSeqGene
- Range
-
5002..19343
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001326559.2 → NP_001313488.2 anion exchange protein 3 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in a longer protein (isoform 2), compared to isoform 1. Variants 2 and 4 both encode the same isoform (2).
- Source sequence(s)
-
AC009955, KF459589
- Consensus CDS
-
CCDS2446.1
- UniProtKB/TrEMBL
-
B4DR53
- Conserved Domains (2) summary
-
- PHA03307
Location:2 → 292
- PHA03307; transcriptional regulator ICP4; Provisional
- TIGR00834
Location:349 → 1258
- ae; anion exchange protein
-
NM_005070.4 → NP_005061.3 anion exchange protein 3 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AC009955, KF459589
- Consensus CDS
-
CCDS2445.1
- UniProtKB/Swiss-Prot
- A6H8L2, A8K1Q9, B7ZVX6, B9EGD1, P48751, Q6YIQ9
- UniProtKB/TrEMBL
-
B4DR53
- Related
- ENSP00000350756.3, ENST00000358055.8
- Conserved Domains (1) summary
-
- TIGR00834
Location:322 → 1231
- ae; anion exchange protein
-
NM_201574.3 → NP_963868.3 anion exchange protein 3 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in a longer protein (isoform 2), compared to isoform 1. Variants 2 and 4 both encode the same isoform (2).
- Source sequence(s)
-
AC009955, KF459589
- Consensus CDS
-
CCDS2446.1
- UniProtKB/TrEMBL
-
B4DR53
- Related
- ENSP00000273063.6, ENST00000273063.10
- Conserved Domains (2) summary
-
- PHA03307
Location:2 → 292
- PHA03307; transcriptional regulator ICP4; Provisional
- TIGR00834
Location:349 → 1258
- ae; anion exchange protein
RNA
-
NR_048551.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC009955, KF459589
- Related
-
ENST00000425141.5
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
219627630..219641971
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047445555.1 → XP_047301511.1 anion exchange protein 3 isoform X1
- UniProtKB/Swiss-Prot
- A6H8L2, A8K1Q9, B7ZVX6, B9EGD1, P48751, Q6YIQ9
- UniProtKB/TrEMBL
-
B4DR53
- Related
- ENSP00000314006.3, ENST00000317151.7
-
XM_011511665.3 → XP_011509967.1 anion exchange protein 3 isoform X2
- UniProtKB/TrEMBL
-
B4DR53
- Conserved Domains (4) summary
-
- TIGR00834
Location:296 → 1205
- ae; anion exchange protein
- pfam00955
Location:649 → 1135
- HCO3_cotransp; HCO3- transporter family
- pfam07565
Location:331 → 593
- Band_3_cyto; Band 3 cytoplasmic domain
- pfam15384
Location:102 → 219
- PAXX; PAXX, PAralog of XRCC4 and XLF, also called C9orf142
-
XM_047445557.1 → XP_047301513.1 anion exchange protein 3 isoform X4
- UniProtKB/TrEMBL
-
B4DR53
-
XM_047445556.1 → XP_047301512.1 anion exchange protein 3 isoform X4
- UniProtKB/TrEMBL
-
B4DR53
-
XM_005246790.5 → XP_005246847.1 anion exchange protein 3 isoform X3
- UniProtKB/TrEMBL
-
B4DR53
- Conserved Domains (1) summary
-
- TIGR00834
Location:124 → 1033
- ae; anion exchange protein
-
XM_011511667.3 → XP_011509969.1 anion exchange protein 3 isoform X5
- UniProtKB/TrEMBL
-
B4DS65
- Conserved Domains (2) summary
-
- pfam00955
Location:184 → 670
- HCO3_cotransp; HCO3- transporter family
- pfam07565
Location:4 → 128
- Band_3_cyto; Band 3 cytoplasmic domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
220112359..220126699
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054343463.1 → XP_054199438.1 anion exchange protein 3 isoform X1
- UniProtKB/TrEMBL
-
B4DR53
-
XM_054343466.1 → XP_054199441.1 anion exchange protein 3 isoform X4
- UniProtKB/TrEMBL
-
B4DR53
-
XM_054343464.1 → XP_054199439.1 anion exchange protein 3 isoform X2
- UniProtKB/TrEMBL
-
B4DR53
-
XM_054343467.1 → XP_054199442.1 anion exchange protein 3 isoform X4
- UniProtKB/TrEMBL
-
B4DR53
-
XM_054343465.1 → XP_054199440.1 anion exchange protein 3 isoform X3
- UniProtKB/TrEMBL
-
B4DR53
-
XM_054343468.1 → XP_054199443.1 anion exchange protein 3 isoform X5
- UniProtKB/TrEMBL
-
B4DS65