These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001142946.3 → NP_001136418.1  uncharacterized protein C11orf21 isoform 1

   See identical proteins and their annotated locations for NP_001136418.1

   Status: VALIDATED

   Description

   Transcript Variant: This variant (1) encodes the longer isoform (1).

   Source sequence(s)

   AB029488, AC129929, AK310172

   Consensus CDS

   CCDS44518.1

   UniProtKB/TrEMBL

   E9PAM5

   Related

   ENSP00000406541.2, ENST00000456145.2

   Conserved Domains (1) summary

   pfam15399
   Location:68 → 178

   DUF4620; Domain of unknown function (DUF4620)

2. NM_001329958.2 → NP_001316887.1  uncharacterized protein C11orf21 isoform 2

   Status: VALIDATED

   Description

   Transcript Variant: This variant (2) lacks an alternate exon compared to variant 1. The resulting isoform (2) has a shorter and distinct N-terminus compared to isoform 1.

   Source sequence(s)

   AB029488, AC129929

   Consensus CDS

   CCDS86168.1

   UniProtKB/Swiss-Prot

   Q9P2W6

   UniProtKB/TrEMBL

   A8K4F6

   Related

   ENSP00000370545.4, ENST00000381153.8

   Conserved Domains (1) summary

   pfam15399
   Location:22 → 132

   DUF4620; Domain of unknown function (DUF4620)

RNA

1. NR_138249.2 RNA Sequence

   Status: VALIDATED

   Description

   Transcript Variant: This variant (3) differs in the 5' end compared to variant 1. This variant is represented as non-coding because the predicted protein does not meet RefSeq quality criteria.

   Source sequence(s)

   AC129929, DA941234

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference GRCh38.p14 Primary Assembly

Genomic

1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

   Range

   2295628..2303140 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

1. NC_060935.1 Alternate T2T-CHM13v2.0

   Range

   2385108..2392584 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

The following Reference Sequences have been suppressed. Explain

These RefSeqs were suppressed for the cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related sequence links, or BLAST links (BLink), but may still be retrieved by clicking on their accession.version below.

1. NM_014144.1: Suppressed sequence

   Description

   NM_014144.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.