MAP3K20-AS1 MAP3K20 antisense RNA 1 [Homo sapiens (human)] - Gene

Summary

Official Symbol: MAP3K20-AS1provided by HGNC
Official Full Name: MAP3K20 antisense RNA 1provided by HGNC
Primary source: HGNC:HGNC:27935
See related: Ensembl:ENSG00000238133 AllianceGenome:HGNC:27935
Gene type: ncRNA
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: MLK7-AS1
Expression: Broad expression in heart (RPKM 6.8), endometrium (RPKM 4.1) and 22 other tissues See more
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Genomic context

Location:: 2q31.1

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	2	NC_000002.12 (173197712..173282036, complement)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	2	NC_060926.1 (173684280..173768605, complement)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	2	NC_000002.11 (174062440..174146764, complement)

Chromosome 2 - NC_000002.12 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

These findings demonstrate that knockdown of MLK7-AS1 by siRNA inhibits gastric cancer growth by epigenetically regulating miR-375.
Title: Knockdown of long non-coding RNA MAP3K20 antisense RNA 1 inhibits gastric cancer growth through epigenetically regulating miR-375.

Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

RH69341 (e-PCR)
- UniSTS:45593

A009I04 (e-PCR)
- UniSTS:38449

RH102508 (e-PCR)
- UniSTS:96842

RH94286 (e-PCR)
- UniSTS:92532

RH11697 (e-PCR)
- UniSTS:83321

G32560 (e-PCR)
- UniSTS:117144

RH80553 (e-PCR)
- UniSTS:88774

Other Names

MLK7 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.