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    Svs4 seminal vesicle secretory protein 4 [ Mus musculus (house mouse) ]

    Gene ID: 20941, updated on 9-Dec-2024

    Summary

    Official Symbol
    Svs4provided by MGI
    Official Full Name
    seminal vesicle secretory protein 4provided by MGI
    Primary source
    MGI:MGI:98450
    See related
    Ensembl:ENSMUSG00000016998 AllianceGenome:MGI:98450
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Svp2; Svp4; Svp-2; Svp-4; SVS-IV
    Summary
    Predicted to enable identical protein binding activity. Predicted to be located in extracellular region. Predicted to be part of protein-containing complex. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward genital fat pad adult (RPKM 3.1) See more
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    Genomic context

    See Svs4 in Genome Data Viewer
    Location:
    2 H3; 2 85.01 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (164117876..164120227, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (164275956..164278307, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene semenogelin 1 Neighboring gene seminal vesicle secretory protein 3B Neighboring gene seminal vesicle secretory protein 3A Neighboring gene seminal vesicle secretory protein 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    seminal vesicle secretory protein 4
    Names
    SVS IV
    seminal vesicle protein 2
    seminal vesicle protein 4
    seminal vesicle secretory protein IV

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009300.3NP_033326.1  seminal vesicle secretory protein 4 precursor

      See identical proteins and their annotated locations for NP_033326.1

      Status: PROVISIONAL

      Source sequence(s)
      AK020349, M35732
      Consensus CDS
      CCDS17029.1
      UniProtKB/Swiss-Prot
      A2A4C3, P18419, Q14BU4, Q9D257
      Related
      ENSMUSP00000017142.3, ENSMUST00000017142.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      164117876..164120227 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)