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    Tm2d2 TM2 domain containing 2 [ Mus musculus (house mouse) ]

    Gene ID: 69742, updated on 27-Nov-2024

    Summary

    Official Symbol
    Tm2d2provided by MGI
    Official Full Name
    TM2 domain containing 2provided by MGI
    Primary source
    MGI:MGI:1916992
    See related
    Ensembl:ENSMUSG00000031556 AllianceGenome:MGI:1916992
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Blp1; 2410018G23Rik
    Summary
    Predicted to be located in membrane. Orthologous to human TM2D2 (TM2 domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in kidney adult (RPKM 77.9), colon adult (RPKM 69.0) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Tm2d2 in Genome Data Viewer
    Location:
    8 A2; 8 13.7 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (25507227..25513276)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (25017211..25023260)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene a disintegrin and metallopeptidase domain 32 Neighboring gene STARR-seq mESC enhancer starr_20951 Neighboring gene STARR-seq mESC enhancer starr_20952 Neighboring gene ADAM metallopeptidase domain 9 Neighboring gene STARR-positive B cell enhancer mm9_chr8:26127373-26127674 Neighboring gene HtrA serine peptidase 4 Neighboring gene STARR-positive B cell enhancer ABC_E6628 Neighboring gene pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 Neighboring gene STARR-positive B cell enhancer ABC_E11381 Neighboring gene RIKEN cDNA 5830408C22 gene Neighboring gene STARR-positive B cell enhancer mm9_chr8:26213490-26213791

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    TM2 domain-containing protein 2
    Names
    BBP-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027194.3NP_081470.2  TM2 domain-containing protein 2 precursor

      See identical proteins and their annotated locations for NP_081470.2

      Status: VALIDATED

      Source sequence(s)
      AK045768, BY018367, CO044843
      Consensus CDS
      CCDS22197.1
      UniProtKB/Swiss-Prot
      Q8BJJ1, Q8R0I4, Q9CWL9
      Related
      ENSMUSP00000033961.6, ENSMUST00000033961.7

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      25507227..25513276
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)