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    Ddah2 DDAH family member 2, ADMA independent [ Mus musculus (house mouse) ]

    Gene ID: 51793, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ddah2provided by MGI
    Official Full Name
    DDAH family member 2, ADMA independentprovided by MGI
    Primary source
    MGI:MGI:1859016
    See related
    Ensembl:ENSMUSG00000007039 AllianceGenome:MGI:1859016
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    G6a; Ddah; NG30; DDAH-2; DDAHII; 1110003M04Rik
    Summary
    Predicted to be located in mitochondrion. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; heart; and sensory organ. Orthologous to human DDAH2 (DDAH family member 2, ADMA-independent). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in CNS E11.5 (RPKM 135.9), CNS E14 (RPKM 77.7) and 16 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Ddah2 in Genome Data Viewer
    Location:
    17 B1; 17 18.59 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (35278011..35281075)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (35059035..35062099)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23421 Neighboring gene STARR-seq mESC enhancer starr_42445 Neighboring gene chloride intracellular channel 1 Neighboring gene STARR-positive B cell enhancer ABC_E11641 Neighboring gene megakaryocyte and platelet inhibitory receptor G6b Neighboring gene G6b opposite strand Neighboring gene lymphocyte antigen 6 family member G6C

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    NOT enables dimethylargininase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    putative hydrolase DDAH2
    Names
    Clone 7u
    N(G),N(G)-dimethylarginine dimethylaminohydrolase 2
    dimethylargininase-2
    dimethylarginine dimethylaminohydrolase 2
    inactive N(G),N(G)-dimethylarginine dimethylaminohydrolase 2
    inactive dimethylarginine dimethylaminohydrolase 2
    NP_001177378.1
    NP_058045.1
    XP_006524675.1
    XP_030105756.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001190449.1NP_001177378.1  putative hydrolase DDAH2 isoform 1

      See identical proteins and their annotated locations for NP_001177378.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      AC087117
      Consensus CDS
      CCDS50082.1
      UniProtKB/Swiss-Prot
      Q99LD8
      Related
      ENSMUSP00000007255.7, ENSMUST00000007255.13
      Conserved Domains (1) summary
      cl19186
      Location:62277
      Amidinotransf; Amidinotransferase
    2. NM_016765.3NP_058045.1  putative hydrolase DDAH2 isoform 2

      See identical proteins and their annotated locations for NP_058045.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. It encodes isoform 2, which has a shorter and distinct C-terminus, compared to isoform 1.
      Source sequence(s)
      AC087117
      Consensus CDS
      CCDS57070.1
      UniProtKB/TrEMBL
      O08972
      Related
      ENSMUSP00000134072.2, ENSMUST00000174493.8
      Conserved Domains (1) summary
      cl19186
      Location:62166
      Amidinotransf; Amidinotransferase

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      35278011..35281075
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006524612.5XP_006524675.1  putative hydrolase DDAH2 isoform X1

      See identical proteins and their annotated locations for XP_006524675.1

      UniProtKB/Swiss-Prot
      Q99LD8
      Conserved Domains (1) summary
      cl19186
      Location:62277
      Amidinotransf; Amidinotransferase
    2. XM_030249896.2XP_030105756.1  putative hydrolase DDAH2 isoform X2

      UniProtKB/TrEMBL
      O08972
      Conserved Domains (1) summary
      cl19186
      Location:62166
      Amidinotransf; Amidinotransferase