Pnma5 paraneoplastic antigen family 5 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Pnma5provided by MGI
Official Full Name: paraneoplastic antigen family 5provided by MGI
Primary source: MGI:MGI:2180566
See related: Ensembl:ENSMUSG00000050424 AllianceGenome:MGI:2180566
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: mKIAA1934
Summary: Predicted to enable identical protein binding activity. Involved in meiosis I. Is active in cell cortex and meiotic spindle. Orthologous to human PNMA5 (PNMA family member 5). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Biased expression in placenta adult (RPKM 6.2), genital fat pad adult (RPKM 0.7) and 2 other tissues See more
Orthologs: human all
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Genomic context

Location:: X A7.3; X 37.29 cM

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	X	NC_000086.8 (72077587..72083315, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	X	NC_000086.7 (73033981..73039721, complement)

Chromosome X - NC_000086.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

UniSTS:496785 (e-PCR)
- UniSTS:496785

Pnma3 (e-PCR), detects polymorphism
- UniSTS:496785

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables identical protein binding	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in meiosis I	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
is_active_in cell cortex	IDA Inferred from Direct Assay more info	PubMed
is_active_in meiotic spindle	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: paraneoplastic antigen-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.