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    Msantd5f10 Myb/SANT DNA binding domain containing 5 family member 10 [ Mus musculus (house mouse) ]

    Gene ID: 667780, updated on 9-Dec-2024

    Summary

    Official Symbol
    Msantd5f10provided by MGI
    Official Full Name
    Myb/SANT DNA binding domain containing 5 family member 10provided by MGI
    Primary source
    MGI:MGI:3702126
    See related
    Ensembl:ENSMUSG00000096333 AllianceGenome:MGI:3702126
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm13871
    Summary
    This gene belongs to a family of related genes tandemly arranged in two clusters on chromosome 4. This family, which appears to be mouse-specific and composed of multiple highly similar members, is supported by limited transcript data. Members of the family maintain an intact open reading frame although the encoded protein has no known function. This gene is supported by alignment of transcripts. [provided by RefSeq, Mar 2013]
    Expression
    Biased expression in heart adult (RPKM 1.0) and limb E14.5 (RPKM 0.1) See more
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    Genomic context

    See Msantd5f10 in Genome Data Viewer
    Location:
    4 C3; 4 36.06 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (73820143..73824158, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (73901906..73905921, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene Myb/SANT DNA binding domain containing 5 family member 7 Neighboring gene Myb/SANT DNA binding domain containing 5 family member 8 Neighboring gene Myb/SANT DNA binding domain containing 5 family member 9 Neighboring gene RIKEN cDNA 2310002L09 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC667780

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001177578.2NP_001171049.1  uncharacterized protein LOC667780

      See identical proteins and their annotated locations for NP_001171049.1

      Status: VALIDATED

      Source sequence(s)
      BC172045, BG070130
      Consensus CDS
      CCDS51209.1
      UniProtKB/TrEMBL
      A2BEI6
      Related
      ENSMUSP00000102940.2, ENSMUST00000107319.8

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      73820143..73824158 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)