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    LOC442028 uncharacterized LOC442028 [ Homo sapiens (human) ]

    Gene ID: 442028, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC442028
    Gene description
    uncharacterized LOC442028
    See related
    Ensembl:ENSG00000291024
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 1.7) See more
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    Genomic context

    See LOC442028 in Genome Data Viewer
    Location:
    2q11.1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (94868685..94947342, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (95375212..95453843, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (95534430..95613087, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 20 family member A8, pseudogene Neighboring gene RNA, U6 small nuclear 1320, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:95535972-95536485 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:95536999-95537512 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:95539413-95540274 Neighboring gene SOWAHC pseudogene 5 Neighboring gene tektin 4 Neighboring gene MT-CO1 pseudogene 48 Neighboring gene MT-CO3 pseudogene 45 Neighboring gene ribosomal protein S24 pseudogene 6 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:95609034-95609219 Neighboring gene uncharacterized LOC105373487 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:95660342-95660890 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:95660891-95661438 Neighboring gene RNA, 7SL, cytoplasmic 575, pseudogene Neighboring gene MAL antisense RNA 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_037597.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC097374
      Related
      ENST00000582835.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      94868685..94947342 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      95375212..95453843 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)