PRR23C proline rich 23C [Homo sapiens (human)] - Gene

Summary

Official Symbol: PRR23Cprovided by HGNC
Official Full Name: proline rich 23Cprovided by HGNC
Primary source: HGNC:HGNC:37173
See related: Ensembl:ENSG00000233701 AllianceGenome:HGNC:37173
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs: all
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Genomic context

Location:: 3q23

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	3	NC_000003.12 (139042102..139044892, complement)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	3	NC_060927.1 (141783116..141785903, complement)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	3	NC_000003.11 (138760944..138763734, complement)

Chromosome 3 - NC_000003.12 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

D8S2279 (e-PCR)
- UniSTS:473907

D11S3114 (e-PCR)
- UniSTS:152207

D16S325 (e-PCR)
- UniSTS:147089

General protein information

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Preferred Names: proline-rich protein 23C

Names: proline-rich protein 23A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001134657.1 → NP_001128129.1 proline-rich protein 23C

See identical proteins and their annotated locations for NP_001128129.1

Status: VALIDATED

Source sequence(s)

AC069525

Consensus CDS

CCDS46924.1

UniProtKB/Swiss-Prot

Q6ZRP0

Related

ENSP00000396648.1, ENST00000413199.1

Conserved Domains (1) summary

pfam10630
Location:2 → 259

DUF2476; Protein of unknown function (DUF2476)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

NC_000003.12 Reference GRCh38.p14 Primary Assembly

Range

139042102..139044892 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

NC_060927.1 Alternate T2T-CHM13v2.0

Range

141783116..141785903 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_001004315.1: Suppressed sequence

Description

NM_001004315.1: This RefSeq was permanently suppressed because currently sufficient data to support this transcript do not exist and the transcript is a nonsense-mediated mRNA decay (NMD) candidate.