U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    VRP1 Vrp1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851051, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    VRP1
    Official Full Name
    Vrp1p
    Primary source
    SGD:S000004329
    Locus tag
    YLR337C
    See related
    AllianceGenome:SGD:S000004329; FungiDB:YLR337C; VEuPathDB:YLR337C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    END5; MDP2; YLR337W
    Summary
    Enables actin binding activity. Involved in several processes, including actin cortical patch localization; bipolar cellular bud site selection; and positive regulation of Arp2/3 complex-mediated actin nucleation. Located in actin cortical patch; cellular bud neck; and incipient cellular bud site. Orthologous to human WIPF1 (WAS/WASL interacting protein family member 1) and WIPF2 (WAS/WASL interacting protein family member 2). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See VRP1 in Genome Data Viewer
    Location:
    chromosome: XII
    Exon count:
    1
    Sequence:
    Chromosome: XII; NC_001144.5 (802653..805106, complement)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene nucleoporin NUP2 Neighboring gene Sgd1p Neighboring gene ribosomal protein P0 Neighboring gene Spo77p

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_001144.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A proline-rich protein, verprolin, involved in cytoskeletal organization and cellular growth in the yeast Saccharomyces cerevisiae. Donnelly SF, et al. Mol Microbiol, 1993 Nov. PMID 7968536
    2. Actin binding and proline rich motifs of CR16 play redundant role in growth of vrp1Delta cells. Meng L, et al. Biochem Biophys Res Commun, 2007 May 25. PMID 17418095
    3. The human WASP-interacting protein, WIP, activates the cell polarity pathway in yeast. Vaduva G, et al. J Biol Chem, 1999 Jun 11. PMID 10358064
    4. Vrp1p-Las17p interaction is critical for actin patch polarization but is not essential for growth or fluid phase endocytosis in S. cerevisiae. Wong MH, et al. Biochim Biophys Acta, 2010 Dec. PMID 20816901
    5. Vrp1p functions in both actomyosin ring-dependent and Hof1p-dependent pathways of cytokinesis. Naqvi SN, et al. Traffic, 2001 Mar. PMID 11260524

    See all (138) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These studies provide evidence that WASP (Las17) and WIP (Vrp1) play central roles in establishment of a robust multivalent Src homology 3 domain-proline-rich motif network in vivo, giving Actin-related protein 2/3 complex assembly onset at endocytic sites a switch-like behavior.
      Title: Switch-like Arp2/3 activation upon WASP and WIP recruitment to an apparent threshold level by multivalent linker proteins in vivo.
    2. Vrp1 protin is responsible for temperature sensitivity and plays a role in calcineurin activation and inhibition.
      Title: Screening for a gene deletion mutant whose temperature sensitivity is suppressed by FK506 in budding yeast and its application for a positive screening for drugs inhibiting calcineurin.
    3. Results identify an N-terminal fragment of Las17p able to interact with Vrp1p but not Arp2/3, and suggest that LAs17 interaction with Vrp1 is more important than interaction with Arp2/3 for polarized actin assembly and endocytosis in yeast.
      Title: Las17p-Vrp1p but not Las17p-Arp2/3 interaction is important for actin patch polarization in yeast.
    4. Findings highlight the role of Las17p binding for Vrp1p membrane association, suggest general membrane association may be more important than specific targeting to the cortical actin cytoskeleton for Vrp1p. function in endocytosis and cell growth.
      Title: Verprolin function in endocytosis and actin organization. Roles of the Las17p (yeast WASP)-binding domain and a novel C-terminal actin-binding domain.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables actin binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cortical patch localization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in bipolar cellular bud site selection IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in endocytosis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in positive regulation of Arp2/3 complex-mediated actin nucleation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of cytokinesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cortical patch IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cellular bud neck IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in incipient cellular bud site IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mating projection tip HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Vrp1p
    NP_013441.1
    • Verprolin, proline-rich actin-associated protein; involved in cytoskeletal organization and cytokinesis; promotes actin nucleation and endocytosis; related to mammalian Wiskott-Aldrich syndrome protein (WASP)-interacting protein (WIP)

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      802653..805106 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182226.1 → NP_013441.1  TPA: Vrp1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013441.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VYX7, P37370, Q06133
      UniProtKB/TrEMBL
      E9PA85, N1NZN0
      Conserved Domains (2) summary
      PRK14951
      Location:109 → 240
      PRK14951; DNA polymerase III subunits gamma and tau; Provisional
      cd22064
      Location:27 → 55
      WH2_WAS_WASL; Wiskott Aldrich syndrome homology region 2 (WH2 motif) in WAS/WASL-interacting protein (WIP)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P37370.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools