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    yaiT [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 4056040, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yaiT
    Primary source
    ECOCYC:G6222
    Locus tag
    b4580
    See related
    ASAP:ABE-0285112
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    b0371; b0374; ECK0368; ECK0369; yaiU
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    Genomic context

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    Sequence:
    NC_000913.3 (390251..394418)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene taurine ABC transporter membrane subunit Neighboring gene taurine dioxygenase Neighboring gene porphobilinogen synthase Neighboring gene protein YtiB Neighboring gene IS3 element protein InsF Neighboring gene IS3 element protein InsE Neighboring gene putative DNA-binding transcriptional regulator IprA Neighboring gene peptidoglycan DD-carboxypeptidase/peptidoglycan DD-endopeptidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Combined inactivation and expression strategy to study gene function under physiological conditions: application to identification of new Escherichia coli adhesins. Roux A, et al. J Bacteriol, 2005 Feb. PMID 15659678, Free PMC Article
    2. Fishing new proteins in the twilight zone of genomes: the test case of outer membrane proteins in Escherichia coli K12, Escherichia coli O157:H7, and other Gram-negative bacteria. Casadio R, et al. Protein Sci, 2003 Jun. PMID 12761386, Free PMC Article
    3. A systematic investigation identifies a significant number of probable pseudogenes in the Escherichia coli genome. Homma K, et al. Gene, 2002 Jul 10. PMID 12234664
    4. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    5. BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria. Berven FS, et al. Nucleic Acids Res, 2004 Jul 1. PMID 15215418, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Miscellaneous features

    • Loc: 390251-391708 gene fragment 1 of yaiT
    • Loc: 392970-394418 gene fragment 2 of yaiT

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