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    ybeQ Sel1 repeat-containing protein YbeQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945251, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybeQ
    Official Full Name
    Sel1 repeat-containing protein YbeQ
    Primary source
    ECOCYC:G6351
    Locus tag
    b0644
    See related
    ASAP:ABE-0002201
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0637
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    Genomic context

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    Sequence:
    NC_000913.3 (675570..676547, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene leucine--tRNA ligase Neighboring gene DUF1451 domain-containing protein YbeL Neighboring gene DUF1266 domain-containing protein YbeR Neighboring gene J domain-containing protein DjlB Neighboring gene Sel1 repeat-containing protein YbeT

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparison of the PhoPQ regulon in Escherichia coli and Salmonella typhimurium. Monsieurs P, et al. J Mol Evol, 2005 Apr. PMID 15883881
    2. BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria. Berven FS, et al. Nucleic Acids Res, 2004 Jul 1. PMID 15215418, Free PMC Article
    3. Inferring gene function from evolutionary change in signatures of translation efficiency. Krisko A, et al. Genome Biol, 2014 Mar 3. PMID 24580753, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to oxidative stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Sel1 repeat-containing protein YbeQ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      675570..676547 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415177.4 Sel1 repeat-containing protein YbeQ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415177.4

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P77234
      Conserved Domains (3) summary
      smart00671
      Location:26 → 61
      SEL1; Sel1-like repeats
      COG0790
      Location:62 → 325
      TPR; TPR repeat [Signal transduction mechanisms]
      sd00010
      Location:115 → 144
      SLR; SLR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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