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    ygeW putative carbamoyltransferase YgeW [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945826, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ygeW
    Official Full Name
    putative carbamoyltransferase YgeW
    Primary source
    ECOCYC:G7489
    Locus tag
    b2870
    See related
    ASAP:ABE-0009425
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2866
    Summary
    Although related to arginine, ornithine and putrescine carbamoyltransferases, YgeW is in a distinct clade, indicative of a novel activity (Naumoff, 2004). [More information is available at EcoGene: EG13053].
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    Genomic context

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    Sequence:
    NC_000913.3 (3006262..3007452)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative xanthine dehydrogenase FAD-binding subunit XdhB Neighboring gene putative xanthine dehydrogenase iron-sulfur-binding subunit XdhC Neighboring gene putative sigma(54)-dependent transcriptional regulator YgeV Neighboring gene 2,3-diaminopropionate ammonia-lyase Neighboring gene putative peptidase YgeY

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Retrieving sequences of enzymes experimentally characterized but erroneously annotated : the case of the putrescine carbamoyltransferase. Naumoff DG, et al. BMC Genomics, 2004 Aug 2. PMID 15287962, Free PMC Article
    2. The ygeW encoded protein from Escherichia coli is a knotted ancestral catabolic transcarbamylase. Li Y, et al. Proteins, 2011 Jul. PMID 21557323, Free PMC Article
    3. Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage. Xi H, et al. J Bacteriol, 2000 Oct. PMID 10986234, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The ygeW encoded protein from Escherichia coli is a knotted ancestral catabolic transcarbamylase.
      Title: The ygeW encoded protein from Escherichia coli is a knotted ancestral catabolic transcarbamylase.
    Submit: New GeneRIF Correction

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables amino acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables carboxyl- or carbamoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ornithine carbamoyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in arginine biosynthetic process via ornithine IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in citrulline biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative carbamoyltransferase YgeW

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3006262..3007452
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_026185.1 putative carbamoyltransferase YgeW [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for YP_026185.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q8X6C0
      UniProtKB/TrEMBL
      A0A0H3Q0B1, A0A1X3IWZ5, A0A241QN01, A0A8B3LY65, A0A979H4I1, A0A9P2MKV4, A0AA35F922, A0AAN3V577, A7ZQX8, B7LF55, C3SW57, W1F4T8
      Conserved Domains (1) summary
      PRK07200
      Location:2 → 396
      PRK07200; aspartate/ornithine carbamoyltransferase family protein; Validated
    Nucleotide Protein
    Heading Accession and Version

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