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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001162465.3 → NP_001155937.1 dystrobrevin beta isoform a
See identical proteins and their annotated locations for NP_001155937.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
AC155273, CR974568
- Consensus CDS
-
CCDS49015.1
- UniProtKB/Swiss-Prot
- E9Q0F2, O70563, O70585, Q9CTZ1
- UniProtKB/TrEMBL
-
G3UYM7
- Related
- ENSMUSP00000126194.3, ENSMUST00000164578.9
- Conserved Domains (4) summary
-
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- pfam09068
Location:16 → 140
- EF-hand_2; EF hand
- pfam09069
Location:144 → 232
- EF-hand_3; EF-hand
- cl23720
Location:442 → 522
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
NM_001355528.2 → NP_001342457.1 dystrobrevin beta isoform c
Status: VALIDATED
- Source sequence(s)
-
AC155273, CR974568
- UniProtKB/TrEMBL
-
G3UXK0
- Related
- ENSMUSP00000133722.2, ENSMUST00000173240.8
- Conserved Domains (3) summary
-
- COG1196
Location:407 → 497
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
NM_001374710.2 → NP_001361639.1 dystrobrevin beta isoform d
Status: VALIDATED
- Source sequence(s)
-
AC155273, CR974568
- Consensus CDS
-
CCDS88301.1
- UniProtKB/TrEMBL
- G3UZ87, Q8C8Z9
- Related
- ENSMUSP00000134392.2, ENSMUST00000173199.8
- Conserved Domains (3) summary
-
- COG1196
Location:437 → 527
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
NM_001421902.1 → NP_001408831.1 dystrobrevin beta isoform c
Status: VALIDATED
- Source sequence(s)
-
AC155273, CR974568
- UniProtKB/TrEMBL
-
G3UXK0
-
NM_007886.3 → NP_031912.2 dystrobrevin beta isoform b
See identical proteins and their annotated locations for NP_031912.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and contains an alternate exon in the 3' coding region, which results in a frameshift and an early stop codon compared to variant 1. The encoded isoform (b) is shorter and has a distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AC155273, AK043436, CR974568
- Consensus CDS
-
CCDS36396.2
- UniProtKB/TrEMBL
- Q8C8Z9, Q8K0N0
- Related
- ENSMUSP00000077085.7, ENSMUST00000077930.13
- Conserved Domains (4) summary
-
- PRK00286
Location:355 → 526
- xseA; exodeoxyribonuclease VII large subunit; Reviewed
- PRK05431
Location:440 → 510
- PRK05431; seryl-tRNA synthetase; Provisional
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
RNA
-
NR_027869.3 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) contains three alternate internal exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC155273, CR974568
-
NR_027870.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains two alternate internal exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC155273, AK043436, CR974568
-
NR_149729.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC155273, CR974568
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000078.7 Reference GRCm39 C57BL/6J
- Range
-
3622372..3834070
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017314952.3 → XP_017170441.1 dystrobrevin beta isoform X2
- UniProtKB/TrEMBL
-
G3UXK0
- Conserved Domains (3) summary
-
- COG1196
Location:407 → 497
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_030246547.2 → XP_030102407.1 dystrobrevin beta isoform X7
- UniProtKB/TrEMBL
-
Q8C8Z9
- Conserved Domains (3) summary
-
- COG1196
Location:407 → 497
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_017314955.2 → XP_017170444.1 dystrobrevin beta isoform X12
- UniProtKB/TrEMBL
-
G3UXK0
- Conserved Domains (3) summary
-
- COG1196
Location:407 → 497
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_017314953.3 → XP_017170442.1 dystrobrevin beta isoform X3
- UniProtKB/TrEMBL
-
Q8C8Z9
- Conserved Domains (3) summary
-
- COG1340
Location:404 → 485
- COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_036157176.1 → XP_036013069.1 dystrobrevin beta isoform X10
- UniProtKB/TrEMBL
-
Q8C8Z9
- Conserved Domains (3) summary
-
- COG1340
Location:404 → 485
- COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_011243813.4 → XP_011242115.1 dystrobrevin beta isoform X1
- UniProtKB/TrEMBL
-
Q8C8Z9
- Conserved Domains (3) summary
-
- COG1196
Location:437 → 527
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_011243814.4 → XP_011242116.1 dystrobrevin beta isoform X5
- UniProtKB/TrEMBL
-
Q8C8Z9
- Conserved Domains (4) summary
-
- COG1340
Location:434 → 515
- COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
- PRK00286
Location:355 → 526
- xseA; exodeoxyribonuclease VII large subunit; Reviewed
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_006514960.5 → XP_006515023.1 dystrobrevin beta isoform X6
- UniProtKB/TrEMBL
-
G3UY34
- Conserved Domains (3) summary
-
- COG1196
Location:437 → 527
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_006514961.5 → XP_006515024.1 dystrobrevin beta isoform X8
- UniProtKB/TrEMBL
-
G3UY34
- Related
- ENSMUSP00000133927.2, ENSMUST00000174547.8
- Conserved Domains (3) summary
-
- COG1196
Location:437 → 527
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_006514959.5 → XP_006515022.1 dystrobrevin beta isoform X4
See identical proteins and their annotated locations for XP_006515022.1
- UniProtKB/TrEMBL
- Q8C8Z9, Q8K0N0
- Related
- ENSMUSP00000128230.3, ENSMUST00000164607.9
- Conserved Domains (4) summary
-
- PRK00286
Location:355 → 526
- xseA; exodeoxyribonuclease VII large subunit; Reviewed
- PRK05431
Location:440 → 510
- PRK05431; seryl-tRNA synthetase; Provisional
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_017314954.3 → XP_017170443.1 dystrobrevin beta isoform X9
- UniProtKB/TrEMBL
-
G3UY34
- Conserved Domains (4) summary
-
- COG1340
Location:434 → 515
- COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
- PRK00286
Location:355 → 526
- xseA; exodeoxyribonuclease VII large subunit; Reviewed
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_030246548.2 → XP_030102408.1 dystrobrevin beta isoform X11
- UniProtKB/TrEMBL
-
G3UY34
- Conserved Domains (4) summary
-
- PRK00286
Location:355 → 526
- xseA; exodeoxyribonuclease VII large subunit; Reviewed
- PRK05431
Location:440 → 510
- PRK05431; seryl-tRNA synthetase; Provisional
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_036157183.1 → XP_036013076.1 dystrobrevin beta isoform X19
- Conserved Domains (2) summary
-
- COG1196
Location:157 → 247
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:1 → 39
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
-
XM_036157182.1 → XP_036013075.1 dystrobrevin beta isoform X19
- Conserved Domains (2) summary
-
- COG1196
Location:157 → 247
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:1 → 39
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
-
XM_030246553.2 → XP_030102413.1 dystrobrevin beta isoform X15
- Conserved Domains (4) summary
-
- COG1196
Location:253 → 343
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:87 → 135
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd15901
Location:37 → 60
- EFh_DMD_DYTN_DTN; EF-hand-like motif [structural motif]
- cl07621
Location:1 → 60
- EFh_DMD_DYTN_DTN; EF-hand-like motif found in the dystrophin/dystrobrevin/dystrotelin family
-
XM_036157179.1 → XP_036013072.1 dystrobrevin beta isoform X16
- Conserved Domains (3) summary
-
- COG1196
Location:253 → 343
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:87 → 135
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- pfam09069
Location:1 → 78
- EF-hand_3
-
XM_017314951.3 → XP_017170440.1 dystrobrevin beta isoform X1
- UniProtKB/TrEMBL
-
Q8C8Z9
- Conserved Domains (3) summary
-
- COG1196
Location:437 → 527
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_036157175.1 → XP_036013068.1 dystrobrevin beta isoform X9
- UniProtKB/TrEMBL
-
G3UY34
- Conserved Domains (4) summary
-
- COG1340
Location:434 → 515
- COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
- PRK00286
Location:355 → 526
- xseA; exodeoxyribonuclease VII large subunit; Reviewed
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_036157181.1 → XP_036013074.1 dystrobrevin beta isoform X18
- Conserved Domains (3) summary
-
- COG1340
Location:184 → 265
- COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
- PRK00286
Location:105 → 276
- xseA; exodeoxyribonuclease VII large subunit; Reviewed
- cl00295
Location:1 → 39
- ZZ; Zinc finger, ZZ type. Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ motif coordinates one or two zinc ions and most likely participates in ligand binding or molecular scaffolding. Many proteins containing ZZ motifs have ...
-
XM_030246551.2 → XP_030102411.1 dystrobrevin beta isoform X14
- UniProtKB/TrEMBL
-
G3UYK9
- Conserved Domains (4) summary
-
- COG1196
Location:283 → 373
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:87 → 135
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd15901
Location:37 → 60
- EFh_DMD_DYTN_DTN; EF-hand-like motif [structural motif]
- cl07621
Location:1 → 60
- EFh_DMD_DYTN_DTN; EF-hand-like motif found in the dystrophin/dystrobrevin/dystrotelin family
-
XM_036157180.1 → XP_036013073.1 dystrobrevin beta isoform X17
- Conserved Domains (2) summary
-
- COG1196
Location:187 → 277
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cl00295
Location:1 → 39
- ZZ; Zinc finger, ZZ type. Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ motif coordinates one or two zinc ions and most likely participates in ligand binding or molecular scaffolding. Many proteins containing ZZ motifs have ...
-
XM_030246545.2 → XP_030102405.1 dystrobrevin beta isoform X2
- UniProtKB/TrEMBL
-
G3UXK0
- Conserved Domains (3) summary
-
- COG1196
Location:407 → 497
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
-
XM_030246544.2 → XP_030102404.1 dystrobrevin beta isoform X1
- UniProtKB/TrEMBL
-
Q8C8Z9
- Conserved Domains (3) summary
-
- COG1196
Location:437 → 527
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd02334
Location:241 → 289
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- cd16244
Location:54 → 214
- EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins