U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Npb neuropeptide B [ Mus musculus (house mouse) ]

    Gene ID: 208990, updated on 27-Nov-2024

    Summary

    Official Symbol
    Npbprovided by MGI
    Official Full Name
    neuropeptide Bprovided by MGI
    Primary source
    MGI:MGI:2387153
    See related
    Ensembl:ENSMUSG00000044034 AllianceGenome:MGI:2387153
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PPL7; mPPL7
    Summary
    Predicted to enable G protein-coupled receptor binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway and feeding behavior. Predicted to act upstream of or within adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway. Predicted to be located in extracellular space. Orthologous to human NPB (neuropeptide B). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in adrenal adult (RPKM 41.4), ovary adult (RPKM 39.3) and 22 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Npb in Genome Data Viewer
    Location:
    11 E2; 11 84.33 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (120499303..120499926)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (120608477..120609100)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene 3807 Neighboring gene Aly/REF export factor Neighboring gene STARR-positive B cell enhancer ABC_E1854 Neighboring gene anaphase promoting complex subunit 11 Neighboring gene phosphate cytidylyltransferase 2, ethanolamine Neighboring gene STARR-positive B cell enhancer ABC_E7114 Neighboring gene sirtuin 7 Neighboring gene microRNA 6936

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1)  1 citation

    General protein information

    Preferred Names
    neuropeptide B
    Names
    preproneuropeptide B
    preproprotein L7

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001347616.1NP_001334545.1  neuropeptide B isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AL663030, AW123684
      Consensus CDS
      CCDS83945.1
      UniProtKB/TrEMBL
      A2ABY2
      Related
      ENSMUSP00000050092.5, ENSMUST00000061309.5
    2. NM_001347617.1NP_001334546.1  neuropeptide B isoform 3 precursor

      Status: VALIDATED

      Source sequence(s)
      AK141698, AW123684, BE648548
      Consensus CDS
      CCDS83944.1
      UniProtKB/TrEMBL
      A2ABY0
      Related
      ENSMUSP00000101800.2, ENSMUST00000106194.8
    3. NM_153288.3NP_695020.1  neuropeptide B isoform 1 precursor

      See identical proteins and their annotated locations for NP_695020.1

      Status: VALIDATED

      Source sequence(s)
      AK141698
      Consensus CDS
      CCDS25746.1
      UniProtKB/Swiss-Prot
      Q8K4P1
      UniProtKB/TrEMBL
      Q3UR83
      Related
      ENSMUSP00000101801.3, ENSMUST00000106195.3
      Conserved Domains (1) summary
      pfam15180
      Location:22118
      NPBW; Neuropeptides B and W

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      120499303..120499926
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)