U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Gm527 predicted gene 527 [ Mus musculus (house mouse) ]

    Gene ID: 217648, updated on 27-Nov-2024

    Summary

    Official Symbol
    Gm527provided by MGI
    Official Full Name
    predicted gene 527provided by MGI
    Primary source
    MGI:MGI:2685373
    See related
    Ensembl:ENSMUSG00000047227 AllianceGenome:MGI:2685373
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Orthologous to human C14orf28 (chromosome 14 open reading frame 28). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in testis adult (RPKM 8.2), CNS E18 (RPKM 2.0) and 11 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Gm527 in Genome Data Viewer
    Location:
    12 C1; 12 27.21 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (64964685..64971365)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (64917911..64924591)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene ligatin pseudogene Neighboring gene STARR-seq mESC enhancer starr_32309 Neighboring gene ribosomal protein L7A, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_32310 Neighboring gene STARR-positive B cell enhancer mm9_chr12:66018613-66018914 Neighboring gene predicted gene, 51965 Neighboring gene kelch-like 28 Neighboring gene TOG array regulator of axonemal microtubules 1 Neighboring gene predicted gene, 51966

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General protein information

    Preferred Names
    uncharacterized protein C14orf28 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025605.1NP_001020776.1  uncharacterized protein C14orf28 homolog

      See identical proteins and their annotated locations for NP_001020776.1

      Status: PROVISIONAL

      Source sequence(s)
      BC099503
      Consensus CDS
      CCDS56841.1
      UniProtKB/Swiss-Prot
      Q4KL13
      UniProtKB/TrEMBL
      A0A1Y7VME2
      Related
      ENSMUSP00000059435.5, ENSMUST00000058135.6

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      64964685..64971365
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)